Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.76■■□□□ 1.07
GFRA3O60609 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
GFRA3O60609 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GFRA3O60609 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
GFRA3O60609 MKRN4P-201ENST00000444706 1521 ntBASIC21.75■■□□□ 1.07
GFRA3O60609 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GFRA3O60609 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.75■■□□□ 1.07
GFRA3O60609 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GFRA3O60609 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GFRA3O60609 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GFRA3O60609 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GFRA3O60609 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.75■■□□□ 1.07
GFRA3O60609 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.75■■□□□ 1.07
GFRA3O60609 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.75■■□□□ 1.07
GFRA3O60609 MIR4497-201ENST00000583208 89 ntBASIC21.75■■□□□ 1.07
GFRA3O60609 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.75■■□□□ 1.07
GFRA3O60609 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
GFRA3O60609 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GFRA3O60609 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GFRA3O60609 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GFRA3O60609 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.74■■□□□ 1.07
GFRA3O60609 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GFRA3O60609 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.74■■□□□ 1.07
GFRA3O60609 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.74■■□□□ 1.07
GFRA3O60609 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GFRA3O60609 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GFRA3O60609 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GFRA3O60609 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
GFRA3O60609 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.74■■□□□ 1.07
GFRA3O60609 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GFRA3O60609 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GFRA3O60609 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
GFRA3O60609 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
GFRA3O60609 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
GFRA3O60609 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.73■■□□□ 1.07
GFRA3O60609 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GFRA3O60609 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.73■■□□□ 1.07
GFRA3O60609 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.73■■□□□ 1.07
GFRA3O60609 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
GFRA3O60609 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GFRA3O60609 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.72■■□□□ 1.07
GFRA3O60609 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.72■■□□□ 1.07
GFRA3O60609 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GFRA3O60609 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GFRA3O60609 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
GFRA3O60609 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GFRA3O60609 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
GFRA3O60609 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GFRA3O60609 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.71■■□□□ 1.07
GFRA3O60609 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GFRA3O60609 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GFRA3O60609 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
GFRA3O60609 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GFRA3O60609 UNC93B5-201ENST00000530315 699 ntBASIC21.71■■□□□ 1.07
GFRA3O60609 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.7■■□□□ 1.07
GFRA3O60609 AC096887.2-201ENST00000623443 1957 ntBASIC21.7■■□□□ 1.07
GFRA3O60609 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GFRA3O60609 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GFRA3O60609 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.7■■□□□ 1.06
GFRA3O60609 AC083880.1-201ENST00000608266 535 ntBASIC21.7■■□□□ 1.06
GFRA3O60609 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
GFRA3O60609 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GFRA3O60609 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.7■■□□□ 1.06
GFRA3O60609 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
GFRA3O60609 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.69■■□□□ 1.06
GFRA3O60609 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.69■■□□□ 1.06
GFRA3O60609 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.69■■□□□ 1.06
GFRA3O60609 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.69■■□□□ 1.06
GFRA3O60609 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.69■■□□□ 1.06
GFRA3O60609 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
GFRA3O60609 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GFRA3O60609 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GFRA3O60609 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GFRA3O60609 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GFRA3O60609 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.68■■□□□ 1.06
GFRA3O60609 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
GFRA3O60609 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
GFRA3O60609 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GFRA3O60609 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GFRA3O60609 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.67■■□□□ 1.06
GFRA3O60609 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GFRA3O60609 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms