Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GDF9O60383 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF9O60383 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GDF9O60383 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GDF9O60383 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF9O60383 SLC29A4P1-201ENST00000398760 971 ntBASIC21.66■■□□□ 1.06
GDF9O60383 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
GDF9O60383 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GDF9O60383 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF9O60383 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GDF9O60383 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF9O60383 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GDF9O60383 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF9O60383 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.65■■□□□ 1.06
GDF9O60383 AC005181.1-201ENST00000604782 1256 ntBASIC21.65■■□□□ 1.06
GDF9O60383 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
GDF9O60383 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF9O60383 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF9O60383 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF9O60383 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GDF9O60383 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GDF9O60383 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.64■■□□□ 1.06
GDF9O60383 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF9O60383 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
GDF9O60383 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
GDF9O60383 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.64■■□□□ 1.05
GDF9O60383 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.64■■□□□ 1.05
GDF9O60383 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.64■■□□□ 1.05
GDF9O60383 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF9O60383 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GDF9O60383 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GDF9O60383 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.64■■□□□ 1.05
GDF9O60383 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GDF9O60383 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.63■■□□□ 1.05
GDF9O60383 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.63■■□□□ 1.05
GDF9O60383 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
GDF9O60383 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GDF9O60383 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GDF9O60383 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.63■■□□□ 1.05
GDF9O60383 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GDF9O60383 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GDF9O60383 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GDF9O60383 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GDF9O60383 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.62■■□□□ 1.05
GDF9O60383 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GDF9O60383 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GDF9O60383 AC007322.1-201ENST00000426983 750 ntBASIC21.62■■□□□ 1.05
GDF9O60383 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
GDF9O60383 AC231657.2-201ENST00000624556 255 ntBASIC21.62■■□□□ 1.05
GDF9O60383 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GDF9O60383 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GDF9O60383 FP325331.1-202ENST00000623531 1380 ntBASIC21.61■■□□□ 1.05
GDF9O60383 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GDF9O60383 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.61■■□□□ 1.05
GDF9O60383 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.61■■□□□ 1.05
GDF9O60383 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.61■■□□□ 1.05
GDF9O60383 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.61■■□□□ 1.05
GDF9O60383 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GDF9O60383 POU5F1P3-201ENST00000428824 1078 ntBASIC21.61■■□□□ 1.05
GDF9O60383 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.61■■□□□ 1.05
GDF9O60383 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.61■■□□□ 1.05
GDF9O60383 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.61■■□□□ 1.05
GDF9O60383 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GDF9O60383 DUX4L16-201ENST00000555130 1264 ntBASIC21.61■■□□□ 1.05
GDF9O60383 AC098934.4-201ENST00000564127 592 ntBASIC21.61■■□□□ 1.05
GDF9O60383 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.61■■□□□ 1.05
GDF9O60383 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.61■■□□□ 1.05
GDF9O60383 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
GDF9O60383 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GDF9O60383 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.61■■□□□ 1.05
GDF9O60383 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GDF9O60383 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.61■■□□□ 1.05
GDF9O60383 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDF9O60383 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDF9O60383 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDF9O60383 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GDF9O60383 KRT18P29-201ENST00000397031 1267 ntBASIC21.6■■□□□ 1.05
GDF9O60383 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.6■■□□□ 1.05
GDF9O60383 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
GDF9O60383 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.6■■□□□ 1.05
GDF9O60383 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDF9O60383 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
GDF9O60383 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GDF9O60383 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GDF9O60383 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
GDF9O60383 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.59■■□□□ 1.05
GDF9O60383 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
GDF9O60383 AC079140.4-201ENST00000507448 529 ntBASIC21.59■■□□□ 1.05
GDF9O60383 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
GDF9O60383 ITM2C-210ENST00000620962 501 ntBASIC21.59■■□□□ 1.05
GDF9O60383 AC133041.1-202ENST00000642053 222 ntBASIC21.59■■□□□ 1.05
GDF9O60383 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GDF9O60383 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
GDF9O60383 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GDF9O60383 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
GDF9O60383 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GDF9O60383 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.58■■□□□ 1.05
GDF9O60383 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.58■■□□□ 1.05
GDF9O60383 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.58■■□□□ 1.05
GDF9O60383 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms