Protein–RNA interactions for Protein: O43759

SYNGR1, Synaptogyrin-1, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1O43759 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGR1O43759 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SYNGR1O43759 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNGR1O43759 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNGR1O43759 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.68■□□□□ 0.58
SYNGR1O43759 AC242852.2-201ENST00000615738 1807 ntBASIC18.67■□□□□ 0.58
SYNGR1O43759 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SYNGR1O43759 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNGR1O43759 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNGR1O43759 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 AC080038.3-201ENST00000623346 1952 ntBASIC18.67■□□□□ 0.58
SYNGR1O43759 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNGR1O43759 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SYNGR1O43759 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNGR1O43759 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGR1O43759 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SYNGR1O43759 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGR1O43759 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SYNGR1O43759 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGR1O43759 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGR1O43759 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGR1O43759 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SYNGR1O43759 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGR1O43759 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNGR1O43759 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.66■□□□□ 0.58
SYNGR1O43759 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGR1O43759 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SYNGR1O43759 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGR1O43759 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNGR1O43759 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNGR1O43759 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SYNGR1O43759 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.65■□□□□ 0.58
SYNGR1O43759 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 pRNA.6-201ENST00000610482 90 ntBASIC18.65■□□□□ 0.58
SYNGR1O43759 pRNA.5-201ENST00000612139 90 ntBASIC18.65■□□□□ 0.58
SYNGR1O43759 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNGR1O43759 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 pRNA.11-201ENST00000618423 90 ntBASIC18.65■□□□□ 0.58
SYNGR1O43759 pRNA.13-201ENST00000619112 90 ntBASIC18.65■□□□□ 0.58
SYNGR1O43759 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNGR1O43759 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNGR1O43759 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNGR1O43759 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGR1O43759 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGR1O43759 SRD5A1P1-201ENST00000442297 786 ntBASIC18.64■□□□□ 0.57
SYNGR1O43759 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGR1O43759 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGR1O43759 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.64■□□□□ 0.57
SYNGR1O43759 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGR1O43759 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNGR1O43759 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.64■□□□□ 0.57
SYNGR1O43759 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNGR1O43759 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SYNGR1O43759 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SYNGR1O43759 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNGR1O43759 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGR1O43759 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGR1O43759 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNGR1O43759 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.63■□□□□ 0.57
SYNGR1O43759 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGR1O43759 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNGR1O43759 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGR1O43759 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNGR1O43759 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNGR1O43759 AC139530.1-201ENST00000575312 1977 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms