Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDX4O14627 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDX4O14627 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDX4O14627 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDX4O14627 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDX4O14627 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDX4O14627 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDX4O14627 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.51■■□□□ 1.03
CDX4O14627 AC079140.4-201ENST00000507448 529 ntBASIC21.51■■□□□ 1.03
CDX4O14627 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CDX4O14627 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.51■■□□□ 1.03
CDX4O14627 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDX4O14627 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDX4O14627 AC135731.1-201ENST00000569415 2548 ntBASIC21.5■■□□□ 1.03
CDX4O14627 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.5■■□□□ 1.03
CDX4O14627 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDX4O14627 AC231657.2-201ENST00000624556 255 ntBASIC21.5■■□□□ 1.03
CDX4O14627 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDX4O14627 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDX4O14627 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
CDX4O14627 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDX4O14627 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.49■■□□□ 1.03
CDX4O14627 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.49■■□□□ 1.03
CDX4O14627 DUX4L16-201ENST00000555130 1264 ntBASIC21.49■■□□□ 1.03
CDX4O14627 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDX4O14627 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDX4O14627 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.48■■□□□ 1.03
CDX4O14627 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDX4O14627 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDX4O14627 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.48■■□□□ 1.03
CDX4O14627 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDX4O14627 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDX4O14627 AC069152.1-201ENST00000438030 544 ntBASIC21.48■■□□□ 1.03
CDX4O14627 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.48■■□□□ 1.03
CDX4O14627 AC068587.7-201ENST00000641602 218 ntBASIC21.48■■□□□ 1.03
CDX4O14627 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDX4O14627 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDX4O14627 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDX4O14627 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.48■■□□□ 1.03
CDX4O14627 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.48■■□□□ 1.03
CDX4O14627 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDX4O14627 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDX4O14627 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.47■■□□□ 1.03
CDX4O14627 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDX4O14627 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.47■■□□□ 1.03
CDX4O14627 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDX4O14627 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.47■■□□□ 1.03
CDX4O14627 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.47■■□□□ 1.03
CDX4O14627 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDX4O14627 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.47■■□□□ 1.03
CDX4O14627 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDX4O14627 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CDX4O14627 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDX4O14627 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDX4O14627 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.46■■□□□ 1.03
CDX4O14627 FAM201B-201ENST00000458407 597 ntBASIC21.46■■□□□ 1.03
CDX4O14627 AC093827.2-201ENST00000512654 315 ntBASIC21.46■■□□□ 1.03
CDX4O14627 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.46■■□□□ 1.03
CDX4O14627 AC005181.1-201ENST00000604782 1256 ntBASIC21.46■■□□□ 1.03
CDX4O14627 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDX4O14627 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CDX4O14627 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.45■■□□□ 1.02
CDX4O14627 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDX4O14627 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDX4O14627 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDX4O14627 AC007322.1-201ENST00000426983 750 ntBASIC21.45■■□□□ 1.02
CDX4O14627 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.45■■□□□ 1.02
CDX4O14627 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.45■■□□□ 1.02
CDX4O14627 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.45■■□□□ 1.02
CDX4O14627 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.45■■□□□ 1.02
CDX4O14627 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.45■■□□□ 1.02
CDX4O14627 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.45■■□□□ 1.02
CDX4O14627 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.45■■□□□ 1.02
CDX4O14627 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDX4O14627 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDX4O14627 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDX4O14627 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDX4O14627 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDX4O14627 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDX4O14627 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.44■■□□□ 1.02
CDX4O14627 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDX4O14627 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDX4O14627 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDX4O14627 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDX4O14627 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.44■■□□□ 1.02
CDX4O14627 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDX4O14627 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.44■■□□□ 1.02
CDX4O14627 AC145676.1-201ENST00000514988 2004 ntBASIC21.44■■□□□ 1.02
CDX4O14627 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CDX4O14627 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDX4O14627 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.44■■□□□ 1.02
CDX4O14627 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms