Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLDN4O14493 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLDN4O14493 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN4O14493 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLDN4O14493 SLC47A1P1-202ENST00000449666 945 ntBASIC20.69■□□□□ 0.9
CLDN4O14493 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN4O14493 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN4O14493 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN4O14493 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN4O14493 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLDN4O14493 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLDN4O14493 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN4O14493 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN4O14493 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN4O14493 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.68■□□□□ 0.9
CLDN4O14493 AC091305.1-201ENST00000479476 895 ntBASIC20.68■□□□□ 0.9
CLDN4O14493 SUDS3P1-201ENST00000505831 966 ntBASIC20.68■□□□□ 0.9
CLDN4O14493 AP001330.3-201ENST00000520123 633 ntBASIC20.68■□□□□ 0.9
CLDN4O14493 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.68■□□□□ 0.9
CLDN4O14493 AF213884.3-201ENST00000563833 479 ntBASIC20.68■□□□□ 0.9
CLDN4O14493 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN4O14493 AL031432.3-201ENST00000607698 485 ntBASIC20.68■□□□□ 0.9
CLDN4O14493 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN4O14493 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLDN4O14493 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN4O14493 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN4O14493 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN4O14493 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN4O14493 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN4O14493 MIR939-201ENST00000401314 82 ntBASIC20.67■□□□□ 0.9
CLDN4O14493 AC099791.1-201ENST00000416440 715 ntBASIC20.67■□□□□ 0.9
CLDN4O14493 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN4O14493 AC126544.1-201ENST00000580842 1059 ntBASIC20.67■□□□□ 0.9
CLDN4O14493 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.67■□□□□ 0.9
CLDN4O14493 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN4O14493 AL136967.2-201ENST00000623968 743 ntBASIC20.67■□□□□ 0.9
CLDN4O14493 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN4O14493 RASA4CP-201ENST00000424092 1398 ntBASIC20.67■□□□□ 0.9
CLDN4O14493 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN4O14493 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN4O14493 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.67■□□□□ 0.9
CLDN4O14493 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN4O14493 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN4O14493 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN4O14493 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN4O14493 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN4O14493 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN4O14493 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN4O14493 AC010525.1-201ENST00000585559 441 ntBASIC20.66■□□□□ 0.9
CLDN4O14493 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN4O14493 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN4O14493 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLDN4O14493 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLDN4O14493 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN4O14493 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN4O14493 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CLDN4O14493 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLDN4O14493 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN4O14493 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLDN4O14493 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN4O14493 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN4O14493 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN4O14493 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN4O14493 AP005435.1-201ENST00000529293 1178 ntBASIC20.65■□□□□ 0.9
CLDN4O14493 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN4O14493 AC087239.1-201ENST00000622671 572 ntBASIC20.65■□□□□ 0.9
CLDN4O14493 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN4O14493 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN4O14493 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN4O14493 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CLDN4O14493 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN4O14493 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CLDN4O14493 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN4O14493 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CLDN4O14493 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN4O14493 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN4O14493 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CLDN4O14493 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN4O14493 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN4O14493 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN4O14493 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN4O14493 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN4O14493 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CLDN4O14493 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CLDN4O14493 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN4O14493 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN4O14493 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN4O14493 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN4O14493 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN4O14493 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.63■□□□□ 0.89
CLDN4O14493 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN4O14493 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN4O14493 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN4O14493 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN4O14493 LINC01960-201ENST00000563759 1884 ntBASIC20.62■□□□□ 0.89
CLDN4O14493 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CLDN4O14493 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN4O14493 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLDN4O14493 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLDN4O14493 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms