Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFA4O00483 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NDUFA4O00483 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA4O00483 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.87■□□□□ 0.29
NDUFA4O00483 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA4O00483 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NDUFA4O00483 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NDUFA4O00483 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
NDUFA4O00483 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA4O00483 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA4O00483 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.87■□□□□ 0.29
NDUFA4O00483 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA4O00483 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.87■□□□□ 0.29
NDUFA4O00483 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA4O00483 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NDUFA4O00483 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NDUFA4O00483 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA4O00483 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA4O00483 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA4O00483 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.86■□□□□ 0.29
NDUFA4O00483 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA4O00483 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.86■□□□□ 0.29
NDUFA4O00483 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.86■□□□□ 0.29
NDUFA4O00483 AC011298.3-201ENST00000615796 283 ntBASIC16.86■□□□□ 0.29
NDUFA4O00483 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NDUFA4O00483 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA4O00483 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NDUFA4O00483 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA4O00483 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA4O00483 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.85■□□□□ 0.29
NDUFA4O00483 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA4O00483 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA4O00483 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NDUFA4O00483 SERBP1P1-201ENST00000396021 1160 ntBASIC16.85■□□□□ 0.29
NDUFA4O00483 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA4O00483 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.85■□□□□ 0.29
NDUFA4O00483 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.85■□□□□ 0.29
NDUFA4O00483 AL117328.2-201ENST00000624617 1940 ntBASIC16.85■□□□□ 0.29
NDUFA4O00483 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA4O00483 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NDUFA4O00483 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA4O00483 AC008406.3-201ENST00000620001 1374 ntBASIC16.85■□□□□ 0.29
NDUFA4O00483 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA4O00483 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA4O00483 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.85■□□□□ 0.29
NDUFA4O00483 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NDUFA4O00483 AC087742.1-201ENST00000575880 1738 ntBASIC16.84■□□□□ 0.29
NDUFA4O00483 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA4O00483 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA4O00483 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NDUFA4O00483 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.84■□□□□ 0.29
NDUFA4O00483 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NDUFA4O00483 OR2I1P-207ENST00000453522 948 ntBASIC16.84■□□□□ 0.29
NDUFA4O00483 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA4O00483 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.84■□□□□ 0.29
NDUFA4O00483 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.84■□□□□ 0.29
NDUFA4O00483 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.84■□□□□ 0.29
NDUFA4O00483 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NDUFA4O00483 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.84■□□□□ 0.29
NDUFA4O00483 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.84■□□□□ 0.29
NDUFA4O00483 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA4O00483 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
NDUFA4O00483 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA4O00483 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA4O00483 GUSBP5-202ENST00000510805 1989 ntBASIC16.84■□□□□ 0.29
NDUFA4O00483 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NDUFA4O00483 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA4O00483 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA4O00483 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NDUFA4O00483 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA4O00483 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA4O00483 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NDUFA4O00483 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.83■□□□□ 0.28
NDUFA4O00483 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA4O00483 AC068587.7-201ENST00000641602 218 ntBASIC16.83■□□□□ 0.28
NDUFA4O00483 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA4O00483 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA4O00483 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA4O00483 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA4O00483 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA4O00483 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.82■□□□□ 0.28
NDUFA4O00483 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA4O00483 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA4O00483 AC242852.2-201ENST00000615738 1807 ntBASIC16.82■□□□□ 0.28
NDUFA4O00483 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NDUFA4O00483 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA4O00483 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA4O00483 AC136469.2-201ENST00000623944 1028 ntBASIC16.82■□□□□ 0.28
NDUFA4O00483 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA4O00483 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA4O00483 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.82■□□□□ 0.28
NDUFA4O00483 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFA4O00483 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NDUFA4O00483 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFA4O00483 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms