Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SLC33A1O00400 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC33A1O00400 AL117328.2-201ENST00000624617 1940 ntBASIC18.68■□□□□ 0.58
SLC33A1O00400 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SLC33A1O00400 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC33A1O00400 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC33A1O00400 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC33A1O00400 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC33A1O00400 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC33A1O00400 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC33A1O00400 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SLC33A1O00400 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC33A1O00400 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC33A1O00400 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC33A1O00400 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC33A1O00400 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC33A1O00400 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC33A1O00400 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC33A1O00400 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC33A1O00400 LINC01529-204ENST00000636474 1715 ntBASIC18.66■□□□□ 0.58
SLC33A1O00400 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC33A1O00400 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC33A1O00400 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC33A1O00400 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC33A1O00400 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC33A1O00400 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC33A1O00400 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC33A1O00400 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC33A1O00400 FP325331.1-202ENST00000623531 1380 ntBASIC18.66■□□□□ 0.58
SLC33A1O00400 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC33A1O00400 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC33A1O00400 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC33A1O00400 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC33A1O00400 AC009102.2-201ENST00000606772 1639 ntBASIC18.65■□□□□ 0.58
SLC33A1O00400 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC33A1O00400 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC33A1O00400 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC33A1O00400 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC33A1O00400 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC33A1O00400 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC33A1O00400 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC33A1O00400 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC33A1O00400 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC33A1O00400 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC33A1O00400 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC33A1O00400 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC33A1O00400 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC33A1O00400 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SLC33A1O00400 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SLC33A1O00400 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC33A1O00400 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC33A1O00400 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC33A1O00400 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC33A1O00400 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC33A1O00400 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC33A1O00400 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC33A1O00400 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC33A1O00400 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC33A1O00400 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC33A1O00400 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC33A1O00400 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC33A1O00400 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC33A1O00400 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC33A1O00400 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC33A1O00400 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC33A1O00400 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC33A1O00400 UNC93B8-201ENST00000511903 705 ntBASIC18.63■□□□□ 0.57
SLC33A1O00400 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC33A1O00400 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC33A1O00400 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC33A1O00400 LINC00565-201ENST00000562710 2331 ntBASIC18.62■□□□□ 0.57
SLC33A1O00400 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC33A1O00400 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.62■□□□□ 0.57
SLC33A1O00400 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC33A1O00400 AL035685.1-201ENST00000636663 812 ntBASIC18.62■□□□□ 0.57
SLC33A1O00400 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC33A1O00400 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SLC33A1O00400 ESRRAP2-201ENST00000418437 1549 ntBASIC18.62■□□□□ 0.57
SLC33A1O00400 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC33A1O00400 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC33A1O00400 GUSBP5-202ENST00000510805 1989 ntBASIC18.62■□□□□ 0.57
SLC33A1O00400 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC33A1O00400 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC33A1O00400 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms