Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC12.34□□□□□ -0.43
CHKB-CPT1BH3BT56 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHKB-CPT1BH3BT56 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CHKB-CPT1BH3BT56 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CHKB-CPT1BH3BT56 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CHKB-CPT1BH3BT56 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 MEST-211ENST00000437945 1455 ntTSL 5 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CHKB-CPT1BH3BT56 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CHKB-CPT1BH3BT56 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHKB-CPT1BH3BT56 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC12.3□□□□□ -0.44
CHKB-CPT1BH3BT56 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHKB-CPT1BH3BT56 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms