Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCAF2A6NFQ2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TCAF2A6NFQ2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCAF2A6NFQ2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCAF2A6NFQ2 DUSP8P5-201ENST00000422884 1815 ntBASIC22.66■■□□□ 1.22
TCAF2A6NFQ2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TCAF2A6NFQ2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
TCAF2A6NFQ2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
TCAF2A6NFQ2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCAF2A6NFQ2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCAF2A6NFQ2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.64■■□□□ 1.21
TCAF2A6NFQ2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TCAF2A6NFQ2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.64■■□□□ 1.21
TCAF2A6NFQ2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.64■■□□□ 1.21
TCAF2A6NFQ2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.64■■□□□ 1.21
TCAF2A6NFQ2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.64■■□□□ 1.21
TCAF2A6NFQ2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.64■■□□□ 1.21
TCAF2A6NFQ2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 IGHV3-19-201ENST00000521488 291 ntBASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 AP005435.1-201ENST00000529293 1178 ntBASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TCAF2A6NFQ2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCAF2A6NFQ2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.61■■□□□ 1.21
TCAF2A6NFQ2 TSPY26P-201ENST00000476365 1326 ntBASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
TCAF2A6NFQ2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TCAF2A6NFQ2 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.59■■□□□ 1.21
TCAF2A6NFQ2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TCAF2A6NFQ2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TCAF2A6NFQ2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.59■■□□□ 1.21
TCAF2A6NFQ2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TCAF2A6NFQ2 AC068587.7-201ENST00000641602 218 ntBASIC22.59■■□□□ 1.21
TCAF2A6NFQ2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TCAF2A6NFQ2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TCAF2A6NFQ2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TCAF2A6NFQ2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.58■■□□□ 1.21
TCAF2A6NFQ2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.58■■□□□ 1.21
TCAF2A6NFQ2 AL031602.1-201ENST00000633169 911 ntBASIC22.58■■□□□ 1.21
TCAF2A6NFQ2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
TCAF2A6NFQ2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.58■■□□□ 1.2
TCAF2A6NFQ2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TCAF2A6NFQ2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 IRS3P-201ENST00000223076 1006 ntBASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms