Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 AC087742.1-201ENST00000575880 1738 ntBASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 AC244015.2-201ENST00000616358 1861 ntBASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBFOX3A6NFN3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RBFOX3A6NFN3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RBFOX3A6NFN3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RBFOX3A6NFN3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RBFOX3A6NFN3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RBFOX3A6NFN3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.34■□□□□ 0.37
RBFOX3A6NFN3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.34■□□□□ 0.37
RBFOX3A6NFN3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.34■□□□□ 0.37
RBFOX3A6NFN3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RBFOX3A6NFN3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RBFOX3A6NFN3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.33■□□□□ 0.37
RBFOX3A6NFN3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RBFOX3A6NFN3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RBFOX3A6NFN3 AL391422.3-201ENST00000603791 2761 ntBASIC17.33■□□□□ 0.36
RBFOX3A6NFN3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.33■□□□□ 0.36
RBFOX3A6NFN3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RBFOX3A6NFN3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RBFOX3A6NFN3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RBFOX3A6NFN3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RBFOX3A6NFN3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RBFOX3A6NFN3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 AC025884.2-201ENST00000553429 711 ntBASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.32■□□□□ 0.36
RBFOX3A6NFN3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 ALDH1A3-203ENST00000557963 1670 ntBASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 AL022069.1-201ENST00000568025 1636 ntBASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RBFOX3A6NFN3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 KRT18P10-201ENST00000388836 1287 ntBASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.3■□□□□ 0.36
RBFOX3A6NFN3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RBFOX3A6NFN3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFOX3A6NFN3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFOX3A6NFN3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RBFOX3A6NFN3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFOX3A6NFN3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFOX3A6NFN3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBFOX3A6NFN3 LINC01971-201ENST00000617888 1048 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms