Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 AC135279.3-201ENST00000610945 1311 ntBASIC20.94■□□□□ 0.94
LRIT2A6NDA9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRIT2A6NDA9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 MIR4767-201ENST00000582827 78 ntBASIC20.93■□□□□ 0.94
LRIT2A6NDA9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 AC233723.2-201ENST00000623798 2106 ntBASIC20.93■□□□□ 0.94
LRIT2A6NDA9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRIT2A6NDA9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 AC110285.6-201ENST00000617652 491 ntBASIC20.92■□□□□ 0.94
LRIT2A6NDA9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRIT2A6NDA9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 PBX2P1-201ENST00000493219 1291 ntBASIC20.91■□□□□ 0.94
LRIT2A6NDA9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 AC106739.1-201ENST00000617035 715 ntBASIC20.91■□□□□ 0.94
LRIT2A6NDA9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRIT2A6NDA9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 AC010525.1-201ENST00000585559 441 ntBASIC20.9■□□□□ 0.94
LRIT2A6NDA9 AL031602.1-201ENST00000633169 911 ntBASIC20.9■□□□□ 0.94
LRIT2A6NDA9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRIT2A6NDA9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRIT2A6NDA9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRIT2A6NDA9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRIT2A6NDA9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRIT2A6NDA9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 SLC47A1P1-202ENST00000449666 945 ntBASIC20.88■□□□□ 0.93
LRIT2A6NDA9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRIT2A6NDA9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRIT2A6NDA9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms