Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.22■□□□□ 0.83
CDHR4A6H8M9 AC139530.1-201ENST00000575312 1977 ntBASIC20.21■□□□□ 0.83
CDHR4A6H8M9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 AC080038.3-201ENST00000623346 1952 ntBASIC20.21■□□□□ 0.83
CDHR4A6H8M9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR4A6H8M9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.2■□□□□ 0.82
CDHR4A6H8M9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.2■□□□□ 0.82
CDHR4A6H8M9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.19■□□□□ 0.82
CDHR4A6H8M9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR4A6H8M9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 AL356441.2-201ENST00000443009 864 ntBASIC20.18■□□□□ 0.82
CDHR4A6H8M9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDHR4A6H8M9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
CDHR4A6H8M9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 AC006455.2-201ENST00000429931 906 ntBASIC20.16■□□□□ 0.82
CDHR4A6H8M9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 LINC00565-201ENST00000562710 2331 ntBASIC20.16■□□□□ 0.82
CDHR4A6H8M9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDHR4A6H8M9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 AL512631.2-201ENST00000604634 923 ntBASIC20.15■□□□□ 0.82
CDHR4A6H8M9 AC099791.2-201ENST00000605725 427 ntBASIC20.15■□□□□ 0.82
CDHR4A6H8M9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 AC092053.2-201ENST00000640557 1818 ntBASIC20.15■□□□□ 0.82
CDHR4A6H8M9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms