Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 LINC01960-201ENST00000563759 1884 ntBASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRBV27A0A0K0K1C4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 FP325331.1-202ENST00000623531 1380 ntBASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 U85056.1-201ENST00000616429 682 ntBASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV27A0A0K0K1C4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
TRBV27A0A0K0K1C4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV27A0A0K0K1C4 AC244015.2-201ENST00000616358 1861 ntBASIC15.52■□□□□ 0.08
TRBV27A0A0K0K1C4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV27A0A0K0K1C4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRBV27A0A0K0K1C4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV27A0A0K0K1C4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV27A0A0K0K1C4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV27A0A0K0K1C4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV27A0A0K0K1C4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV27A0A0K0K1C4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV27A0A0K0K1C4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TRBV27A0A0K0K1C4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 KRT18P60-201ENST00000312876 1297 ntBASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV27A0A0K0K1C4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV27A0A0K0K1C4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 RARRES2P2-201ENST00000394842 485 ntBASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 AC009086.3-201ENST00000623486 1008 ntBASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV27A0A0K0K1C4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV27A0A0K0K1C4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms