Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 FAM99A-202ENST00000538190 1989 ntBASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 AC080038.3-201ENST00000623346 1952 ntBASIC14.51□□□□□ -0.09
TRAV13-2A0A0B4J235 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 HCG11-201ENST00000411553 5696 ntBASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 AC090877.2-201ENST00000558441 1738 ntBASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV13-2A0A0B4J235 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 ALDH1A3-203ENST00000557963 1670 ntBASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 SMPD5-203ENST00000639008 1464 ntBASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV13-2A0A0B4J235 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-2A0A0B4J235 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV13-2A0A0B4J235 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms