Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 LINC01960-201ENST00000563759 1884 ntBASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC092053.2-201ENST00000640557 1818 ntBASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-8A0A0A6YYG3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 UNC93B8-201ENST00000511903 705 ntBASIC15.27■□□□□ 0.04
TRBV6-8A0A0A6YYG3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC004687.1-201ENST00000579003 1625 ntBASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AL117332.1-201ENST00000622628 974 ntBASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV6-8A0A0A6YYG3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC139530.1-201ENST00000575312 1977 ntBASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC080038.3-201ENST00000623346 1952 ntBASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV6-8A0A0A6YYG3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 KRT16P3-201ENST00000439127 1283 ntBASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV6-8A0A0A6YYG3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms