Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AL033527.3-201ENST00000566366 1196 ntBASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV6-7A0A0A0MS04 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-7A0A0A0MS04 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-7A0A0A0MS04 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-7A0A0A0MS04 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBV6-7A0A0A0MS04 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBV6-7A0A0A0MS04 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV6-7A0A0A0MS04 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV6-7A0A0A0MS04 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TRBV6-7A0A0A0MS04 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV6-7A0A0A0MS04 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV6-7A0A0A0MS04 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.39■□□□□ 0.53
TRBV6-7A0A0A0MS04 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.39■□□□□ 0.53
TRBV6-7A0A0A0MS04 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV6-7A0A0A0MS04 KRT8P33-201ENST00000508125 1423 ntBASIC18.39■□□□□ 0.53
TRBV6-7A0A0A0MS04 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV6-7A0A0A0MS04 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRBV6-7A0A0A0MS04 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 MIR6722-201ENST00000617286 78 ntBASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 AC005703.6-201ENST00000623265 1329 ntBASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 AC087742.1-201ENST00000575880 1738 ntBASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV6-7A0A0A0MS04 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 FP325331.1-202ENST00000623531 1380 ntBASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 LINC01529-204ENST00000636474 1715 ntBASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV6-7A0A0A0MS04 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 AL031848.2-201ENST00000607670 837 ntBASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV6-7A0A0A0MS04 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 AC080038.3-201ENST00000623346 1952 ntBASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV6-7A0A0A0MS04 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV6-7A0A0A0MS04 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV6-7A0A0A0MS04 AC021242.3-201ENST00000607598 1377 ntBASIC18.33■□□□□ 0.53
TRBV6-7A0A0A0MS04 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms