Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC187A0A096LP49 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC187A0A096LP49 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 AC020928.2-201ENST00000588717 2197 ntBASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 AC004687.1-201ENST00000579003 1625 ntBASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC187A0A096LP49 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 AC010141.3-201ENST00000456659 717 ntBASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 AC138932.3-201ENST00000567634 1902 ntBASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC187A0A096LP49 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC187A0A096LP49 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 AC006970.2-201ENST00000450065 779 ntBASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC187A0A096LP49 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 KRT18P11-201ENST00000435214 1283 ntBASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 SMUG1P1-201ENST00000590640 811 ntBASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC187A0A096LP49 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC187A0A096LP49 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms