Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV9-2A0A087WT02 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV9-2A0A087WT02 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV9-2A0A087WT02 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 MIR6089-201ENST00000616698 64 ntBASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV9-2A0A087WT02 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 AC019171.1-201ENST00000601251 1056 ntBASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV9-2A0A087WT02 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 AC092053.2-201ENST00000640557 1818 ntBASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV9-2A0A087WT02 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 AC022616.5-201ENST00000518796 181 ntBASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV9-2A0A087WT02 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 LINC01521-201ENST00000504184 1943 ntBASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 AC010980.1-201ENST00000587192 1142 ntBASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV9-2A0A087WT02 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms