Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV23DV6A0A075B6W5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV23DV6A0A075B6W5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV23DV6A0A075B6W5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
TRAV23DV6A0A075B6W5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAV23DV6A0A075B6W5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRAV23DV6A0A075B6W5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 AC092667.1-201ENST00000434301 2586 ntBASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV23DV6A0A075B6W5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 AC139530.1-201ENST00000575312 1977 ntBASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV23DV6A0A075B6W5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 GPX1-201ENST00000419349 1106 ntBASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV23DV6A0A075B6W5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 FBXW4P1-201ENST00000426721 2239 ntBASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV23DV6A0A075B6W5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV23DV6A0A075B6W5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV23DV6A0A075B6W5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV23DV6A0A075B6W5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms