Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 KRT8P5-201ENST00000592443 1458 ntBASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 TNKS-213ENST00000522110 2900 ntBASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 AL662890.1-201ENST00000396818 632 ntBASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 MIR4525-201ENST00000580000 75 ntBASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 AC009533.1-201ENST00000539757 3158 ntBASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 USP14-208ENST00000582707 1803 ntTSL 5 BASIC12.14□□□□□ -0.47
POLR2J2Q9GZM3 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 CTAGE7P-201ENST00000435712 2436 ntBASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 LINC01227-205ENST00000567317 1338 ntTSL 2 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 AC091046.1-201ENST00000331871 207 ntBASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 OR2T32P-201ENST00000403423 963 ntBASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 RNA5SP406-201ENST00000516106 112 ntBASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 AC068867.1-201ENST00000559855 150 ntBASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 AC007952.4-201ENST00000573866 637 ntBASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 AC005777.1-201ENST00000588332 187 ntBASIC12.13□□□□□ -0.47
POLR2J2Q9GZM3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms