Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A1P43005 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A1P43005 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A1P43005 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A1P43005 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.69□□□□□ -0.22
SLC1A1P43005 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC13.69□□□□□ -0.22
SLC1A1P43005 BCYRN1-201ENST00000418539 200 ntBASIC13.69□□□□□ -0.22
SLC1A1P43005 AC104961.1-201ENST00000427605 771 ntBASIC13.69□□□□□ -0.22
SLC1A1P43005 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.69□□□□□ -0.22
SLC1A1P43005 RPL7P35-201ENST00000446943 740 ntBASIC13.69□□□□□ -0.22
SLC1A1P43005 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A1P43005 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A1P43005 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A1P43005 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.69□□□□□ -0.22
SLC1A1P43005 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.69□□□□□ -0.22
SLC1A1P43005 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 AC073911.3-201ENST00000624401 631 ntBASIC13.69□□□□□ -0.22
SLC1A1P43005 AC026336.4-201ENST00000624565 1050 ntBASIC13.69□□□□□ -0.22
SLC1A1P43005 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A1P43005 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 SLC25A19-210ENST00000580994 1554 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SLC1A1P43005 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
SLC1A1P43005 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 YAP1P1-201ENST00000401504 1393 ntBASIC13.69□□□□□ -0.22
SLC1A1P43005 AC064850.1-201ENST00000413279 1398 ntBASIC13.69□□□□□ -0.22
SLC1A1P43005 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLC1A1P43005 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SLC1A1P43005 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 AL359510.2-201ENST00000624958 2249 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 AC080013.1-204ENST00000607426 2185 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A1P43005 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 AC067852.6-201ENST00000591237 1736 ntBASIC13.68□□□□□ -0.22
SLC1A1P43005 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC13.68□□□□□ -0.22
SLC1A1P43005 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC13.68□□□□□ -0.22
SLC1A1P43005 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SLC1A1P43005 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLC1A1P43005 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms