Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 RN7SKP109-201ENST00000410592 316 ntBASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 BCYRN1-201ENST00000418539 200 ntBASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 IGLV3-15-201ENST00000518356 244 ntBASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 AC079416.2-201ENST00000625035 1193 ntBASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAF6Q9Y4K3 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 OR2T32P-201ENST00000403423 963 ntBASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 CALR4P-201ENST00000431943 946 ntBASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 CEP164P1-201ENST00000455142 418 ntBASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 AC006529.1-201ENST00000459978 637 ntBASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 RNA5SP406-201ENST00000516106 112 ntBASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 IGLVI-63-201ENST00000524184 384 ntBASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 AC084781.1-201ENST00000613737 656 ntBASIC12.79□□□□□ -0.36
TRAF6Q9Y4K3 AC010503.4-201ENST00000615487 688 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms