Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A1P43005 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A1P43005 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC1A1P43005 AC026992.2-203ENST00000563004 2419 ntBASIC13.71□□□□□ -0.21
SLC1A1P43005 AL354861.3-201ENST00000600140 2412 ntBASIC13.71□□□□□ -0.21
SLC1A1P43005 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC1A1P43005 AC015818.1-201ENST00000451011 244 ntBASIC13.71□□□□□ -0.21
SLC1A1P43005 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC1A1P43005 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC1A1P43005 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC1A1P43005 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC1A1P43005 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.71□□□□□ -0.21
SLC1A1P43005 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC1A1P43005 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 AC073869.4-201ENST00000620841 800 ntBASIC13.71□□□□□ -0.21
SLC1A1P43005 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A1P43005 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A1P43005 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A1P43005 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A1P43005 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SLC1A1P43005 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A1P43005 CICP18-201ENST00000406017 2812 ntBASIC13.71□□□□□ -0.22
SLC1A1P43005 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC13.71□□□□□ -0.22
SLC1A1P43005 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A1P43005 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A1P43005 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SLC1A1P43005 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A1P43005 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A1P43005 INTS14-203ENST00000431261 1980 ntTSL 2 BASIC13.71□□□□□ -0.22
SLC1A1P43005 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC13.71□□□□□ -0.22
SLC1A1P43005 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC13.71□□□□□ -0.22
SLC1A1P43005 BX324167.2-201ENST00000623717 3316 ntBASIC13.7□□□□□ -0.22
SLC1A1P43005 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 AC010182.1-201ENST00000548943 2434 ntBASIC13.7□□□□□ -0.22
SLC1A1P43005 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 AL357509.1-201ENST00000641892 2013 ntBASIC13.7□□□□□ -0.22
SLC1A1P43005 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 OR7E37P-201ENST00000421076 897 ntBASIC13.7□□□□□ -0.22
SLC1A1P43005 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 RPL13AP19-201ENST00000434320 584 ntBASIC13.7□□□□□ -0.22
SLC1A1P43005 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC1A1P43005 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.7□□□□□ -0.22
SLC1A1P43005 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 RPL7AP53-201ENST00000468834 793 ntBASIC13.7□□□□□ -0.22
SLC1A1P43005 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.7□□□□□ -0.22
SLC1A1P43005 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.7□□□□□ -0.22
SLC1A1P43005 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC13.7□□□□□ -0.22
SLC1A1P43005 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A1P43005 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC13.7□□□□□ -0.22
SLC1A1P43005 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A1P43005 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms