Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC005580.1-203ENST00000591926 503 ntTSL 4 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AC003002.4-203ENST00000596400 630 ntTSL 4 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AL031587.3-201ENST00000609976 814 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 ZNF646P1-201ENST00000621811 995 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 RAD51-202ENST00000382643 1588 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AC111170.3-201ENST00000624282 2464 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 AL138847.2-201ENST00000624477 1819 ntBASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC19.44■□□□□ 0.7
RIMBP3Q9UFD9 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 ARL6IP4-202ENST00000357866 546 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 LINC00395-201ENST00000444536 406 ntTSL 3 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 DDX11L1-201ENST00000450305 632 ntBASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 LINC01298-201ENST00000523171 519 ntTSL 3 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 PAX3-202ENST00000336840 2038 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 FCRL6-203ENST00000368106 1306 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 SP3P-201ENST00000414049 2065 ntBASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 TPM3-202ENST00000302206 741 ntTSL 3 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 NANOGNB-201ENST00000382119 907 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 AC013248.2-201ENST00000412454 459 ntBASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 Z97353.1-201ENST00000422915 578 ntBASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 RABL3-206ENST00000483733 760 ntTSL 5 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 AC091675.1-201ENST00000486251 351 ntBASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 AP003692.1-201ENST00000521706 796 ntTSL 5 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 CPT1A-204ENST00000538994 617 ntTSL 5 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 AC126614.1-201ENST00000547552 548 ntTSL 4 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 HMGB1P8-201ENST00000558211 949 ntBASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 AC105402.3-201ENST00000601658 784 ntTSL 5 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 AC092120.3-201ENST00000605168 568 ntBASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 Metazoa_SRP.151-201ENST00000616313 273 ntBASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 AL031601.2-201ENST00000622823 457 ntTSL 3 BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 AC006453.2-201ENST00000636531 1196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIMBP3Q9UFD9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 CHTF8P1-201ENST00000414660 1541 ntBASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 PCYT1B-202ENST00000379144 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 AC139491.6-202ENST00000637171 2077 ntBASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 RN7SKP9-201ENST00000364923 299 ntBASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 AC119677.1-201ENST00000414199 471 ntTSL 3 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 PROSER3-203ENST00000421853 650 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 BET1-205ENST00000433727 1031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 NREP-208ENST00000453526 559 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 LINC02108-201ENST00000504333 1184 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 PROSER3-206ENST00000536950 1266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 PINLYP-204ENST00000562365 706 ntTSL 2 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIMBP3Q9UFD9 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 AC092587.1-201ENST00000410042 669 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 GHRL-203ENST00000422159 401 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 AC008132.2-201ENST00000437537 391 ntBASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 AL161672.1-201ENST00000450968 818 ntBASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 SURF6P1-201ENST00000451854 827 ntBASIC19.41■□□□□ 0.7
RIMBP3Q9UFD9 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms