Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CLK1P49759 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.49□□□□□ -0.41
CLK1P49759 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.49□□□□□ -0.41
CLK1P49759 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
CLK1P49759 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLK1P49759 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLK1P49759 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLK1P49759 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLK1P49759 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLK1P49759 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLK1P49759 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLK1P49759 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CLK1P49759 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLK1P49759 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC12.49□□□□□ -0.41
CLK1P49759 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLK1P49759 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CLK1P49759 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 AC019109.1-201ENST00000401725 1874 ntBASIC12.48□□□□□ -0.41
CLK1P49759 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.48□□□□□ -0.41
CLK1P49759 AC040160.2-201ENST00000623816 1675 ntBASIC12.48□□□□□ -0.41
CLK1P49759 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CLK1P49759 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLK1P49759 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC12.48□□□□□ -0.41
CLK1P49759 AC026316.1-201ENST00000398900 414 ntBASIC12.48□□□□□ -0.41
CLK1P49759 GGTLC4P-201ENST00000402176 664 ntBASIC12.48□□□□□ -0.41
CLK1P49759 TUBB2BP1-201ENST00000404155 871 ntBASIC12.48□□□□□ -0.41
CLK1P49759 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.48□□□□□ -0.41
CLK1P49759 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.48□□□□□ -0.41
CLK1P49759 EEF1DP2-201ENST00000433698 843 ntBASIC12.48□□□□□ -0.41
CLK1P49759 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.48□□□□□ -0.41
CLK1P49759 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.48□□□□□ -0.41
CLK1P49759 NDUFS6P1-201ENST00000485187 316 ntBASIC12.48□□□□□ -0.41
CLK1P49759 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 AC095040.1-201ENST00000513286 675 ntBASIC12.48□□□□□ -0.41
CLK1P49759 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CLK1P49759 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.48□□□□□ -0.41
CLK1P49759 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.48□□□□□ -0.41
CLK1P49759 AP001184.1-201ENST00000637936 376 ntBASIC12.48□□□□□ -0.41
CLK1P49759 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 AC126564.1-201ENST00000623628 2013 ntBASIC12.48□□□□□ -0.41
CLK1P49759 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 DBIL5P-203ENST00000536214 2677 ntBASIC12.48□□□□□ -0.41
CLK1P49759 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLK1P49759 CICP2-201ENST00000420675 2328 ntBASIC12.48□□□□□ -0.41
CLK1P49759 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.48□□□□□ -0.41
CLK1P49759 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.48□□□□□ -0.41
CLK1P49759 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLK1P49759 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.47□□□□□ -0.41
CLK1P49759 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 CSPG4P12-201ENST00000558282 4853 ntBASIC12.47□□□□□ -0.41
CLK1P49759 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLK1P49759 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLK1P49759 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.47□□□□□ -0.41
CLK1P49759 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLK1P49759 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms