Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.55□□□□□ -0.4
SCN2BO60939 AC114781.1-201ENST00000450559 1028 ntBASIC12.55□□□□□ -0.4
SCN2BO60939 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.55□□□□□ -0.4
SCN2BO60939 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 AP000911.2-201ENST00000534330 502 ntBASIC12.55□□□□□ -0.4
SCN2BO60939 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.55□□□□□ -0.4
SCN2BO60939 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 METTL7AP1-201ENST00000547343 496 ntBASIC12.55□□□□□ -0.4
SCN2BO60939 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 RN7SL134P-201ENST00000579756 303 ntBASIC12.55□□□□□ -0.4
SCN2BO60939 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 AC103810.10-201ENST00000606504 343 ntBASIC12.55□□□□□ -0.4
SCN2BO60939 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.55□□□□□ -0.4
SCN2BO60939 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC12.55□□□□□ -0.4
SCN2BO60939 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 AC092117.1-201ENST00000621230 3250 ntBASIC12.55□□□□□ -0.4
SCN2BO60939 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 AC009549.1-201ENST00000603468 1686 ntBASIC12.54□□□□□ -0.4
SCN2BO60939 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.54□□□□□ -0.4
SCN2BO60939 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.54□□□□□ -0.4
SCN2BO60939 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SCN2BO60939 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SCN2BO60939 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC12.54□□□□□ -0.4
SCN2BO60939 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC12.54□□□□□ -0.4
SCN2BO60939 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 OR7E115P-201ENST00000382617 1024 ntBASIC12.54□□□□□ -0.4
SCN2BO60939 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.54□□□□□ -0.4
SCN2BO60939 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.54□□□□□ -0.4
SCN2BO60939 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.54□□□□□ -0.4
SCN2BO60939 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC12.54□□□□□ -0.4
SCN2BO60939 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
SCN2BO60939 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.54□□□□□ -0.4
SCN2BO60939 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.54□□□□□ -0.4
SCN2BO60939 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
SCN2BO60939 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.54□□□□□ -0.4
SCN2BO60939 AC140113.1-201ENST00000603467 169 ntBASIC12.54□□□□□ -0.4
SCN2BO60939 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SCN2BO60939 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SCN2BO60939 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SCN2BO60939 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC12.53□□□□□ -0.4
SCN2BO60939 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms