Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 GK-202ENST00000378941 458 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AL512384.1-201ENST00000406683 331 ntBASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 NAGK-204ENST00000443872 878 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 TERF1P3-201ENST00000505638 1227 ntBASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AC009779.1-201ENST00000551138 283 ntBASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AL023803.2-201ENST00000620080 638 ntBASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 KRT18P40-201ENST00000599859 1571 ntBASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 GOLGA8UP-201ENST00000527159 1755 ntBASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AL357140.3-201ENST00000639753 1983 ntBASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RCL1Q9Y2P8 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 PCDHA9-201ENST00000378122 6900 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 RN7SKP102-201ENST00000411186 315 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 PPP1R2P4-201ENST00000424051 595 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 SNORD3B-2-202ENST00000571722 791 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AC132938.2-201ENST00000579188 680 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AC026304.1-201ENST00000597953 561 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AL133467.4-201ENST00000602953 725 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AC090164.2-201ENST00000611487 516 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 AC068587.8-201ENST00000641239 219 ntBASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RCL1Q9Y2P8 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms