Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC11.85□□□□□ -0.51
ZIC3O60481 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ZIC3O60481 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ZIC3O60481 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 MARCKSL1P2-201ENST00000401037 976 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC11.85□□□□□ -0.51
ZIC3O60481 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 RPSAP16-201ENST00000447583 821 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 AADAC-202ENST00000488869 719 ntTSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 KRT18P63-201ENST00000505463 979 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 AC233724.9-201ENST00000511694 407 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 AL118516.1-201ENST00000564152 670 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 HNRNPA1P16-201ENST00000575692 955 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 RN7SL596P-201ENST00000582123 288 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 CLPP-205ENST00000596605 646 ntTSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC11.85□□□□□ -0.51
ZIC3O60481 AL031719.1-201ENST00000623365 2587 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.85□□□□□ -0.51
ZIC3O60481 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ZIC3O60481 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 CYP2B7P-201ENST00000541697 1476 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.84□□□□□ -0.51
ZIC3O60481 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 AL606760.3-201ENST00000569869 3591 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ZIC3O60481 PMF1-201ENST00000368273 884 ntTSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC11.84□□□□□ -0.51
ZIC3O60481 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ZIC3O60481 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC11.84□□□□□ -0.51
ZIC3O60481 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ZIC3O60481 AL049597.1-201ENST00000447415 555 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC11.84□□□□□ -0.51
ZIC3O60481 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC11.84□□□□□ -0.51
ZIC3O60481 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 AC093700.1-201ENST00000503348 717 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 AC120498.7-201ENST00000562876 330 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC11.84□□□□□ -0.51
ZIC3O60481 AC010601.2-201ENST00000623060 774 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC11.84□□□□□ -0.51
ZIC3O60481 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 AC099521.3-201ENST00000624251 2938 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 TNRC18P1-201ENST00000502875 3650 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 LINC00563-201ENST00000566370 1400 ntBASIC11.84□□□□□ -0.51
ZIC3O60481 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ZIC3O60481 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ZIC3O60481 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ZIC3O60481 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms