Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRB4X5D2U9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HLA-DRB4X5D2U9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRB4X5D2U9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRB4X5D2U9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRB4X5D2U9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRB4X5D2U9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HLA-DRB4X5D2U9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HLA-DRB4X5D2U9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DRB4X5D2U9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DRB4X5D2U9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DRB4X5D2U9 AC127496.7-201ENST00000625110 1798 ntBASIC16.52■□□□□ 0.24
HLA-DRB4X5D2U9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DRB4X5D2U9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRB4X5D2U9 DUX4L4-201ENST00000566884 1269 ntBASIC16.52■□□□□ 0.24
HLA-DRB4X5D2U9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HLA-DRB4X5D2U9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRB4X5D2U9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRB4X5D2U9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRB4X5D2U9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRB4X5D2U9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DRB4X5D2U9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 AC241377.3-202ENST00000626088 1088 ntBASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 AC241585.3-202ENST00000628937 1088 ntBASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 AC245100.8-202ENST00000629247 1058 ntBASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DRB4X5D2U9 AC233723.2-201ENST00000623798 2106 ntBASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 AC009086.3-201ENST00000623486 1008 ntBASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DRB4X5D2U9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 C1orf229-201ENST00000623686 2258 ntBASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DRB4X5D2U9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 SRD5A1P1-201ENST00000442297 786 ntBASIC16.47■□□□□ 0.23
HLA-DRB4X5D2U9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms