Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AC145350.3-201ENST00000569033 163 ntBASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
BIVM-ERCC5R4GMW8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
BIVM-ERCC5R4GMW8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
BIVM-ERCC5R4GMW8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
BIVM-ERCC5R4GMW8 AC016769.1-201ENST00000409132 1010 ntBASIC37.37■■■■□ 3.57
BIVM-ERCC5R4GMW8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC37.37■■■■□ 3.57
BIVM-ERCC5R4GMW8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 CDCA4P2-201ENST00000441182 718 ntBASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC37.36■■■■□ 3.57
BIVM-ERCC5R4GMW8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 GAS2L1P2-201ENST00000436355 1356 ntBASIC37.35■■■■□ 3.57
BIVM-ERCC5R4GMW8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
BIVM-ERCC5R4GMW8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
BIVM-ERCC5R4GMW8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC37.34■■■■□ 3.57
BIVM-ERCC5R4GMW8 AC004687.1-201ENST00000579003 1625 ntBASIC37.34■■■■□ 3.57
BIVM-ERCC5R4GMW8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 SMUG1P1-201ENST00000590640 811 ntBASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
BIVM-ERCC5R4GMW8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC37.32■■■■□ 3.57
BIVM-ERCC5R4GMW8 AC080038.1-201ENST00000611274 1154 ntBASIC37.32■■■■□ 3.57
BIVM-ERCC5R4GMW8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.57
BIVM-ERCC5R4GMW8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
BIVM-ERCC5R4GMW8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC37.32■■■■□ 3.56
BIVM-ERCC5R4GMW8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
BIVM-ERCC5R4GMW8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC37.31■■■■□ 3.56
BIVM-ERCC5R4GMW8 AC068587.7-201ENST00000641602 218 ntBASIC37.31■■■■□ 3.56
BIVM-ERCC5R4GMW8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
BIVM-ERCC5R4GMW8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
BIVM-ERCC5R4GMW8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
BIVM-ERCC5R4GMW8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
BIVM-ERCC5R4GMW8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC37.3■■■■□ 3.56
BIVM-ERCC5R4GMW8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
BIVM-ERCC5R4GMW8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
BIVM-ERCC5R4GMW8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC37.3■■■■□ 3.56
BIVM-ERCC5R4GMW8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC37.3■■■■□ 3.56
BIVM-ERCC5R4GMW8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
BIVM-ERCC5R4GMW8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC37.29■■■■□ 3.56
BIVM-ERCC5R4GMW8 COX20-201ENST00000366528 568 ntTSL 2 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
BIVM-ERCC5R4GMW8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC37.27■■■■□ 3.56
BIVM-ERCC5R4GMW8 BX005040.4-201ENST00000637145 1518 ntBASIC37.27■■■■□ 3.56
BIVM-ERCC5R4GMW8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC37.27■■■■□ 3.56
BIVM-ERCC5R4GMW8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC37.27■■■■□ 3.56
BIVM-ERCC5R4GMW8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC37.27■■■■□ 3.56
BIVM-ERCC5R4GMW8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
BIVM-ERCC5R4GMW8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
BIVM-ERCC5R4GMW8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC37.26■■■■□ 3.56
BIVM-ERCC5R4GMW8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC37.26■■■■□ 3.56
BIVM-ERCC5R4GMW8 AC104771.1-201ENST00000603335 964 ntBASIC37.26■■■■□ 3.56
BIVM-ERCC5R4GMW8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
BIVM-ERCC5R4GMW8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
BIVM-ERCC5R4GMW8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC37.25■■■■□ 3.55
BIVM-ERCC5R4GMW8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC37.25■■■■□ 3.55
BIVM-ERCC5R4GMW8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC37.25■■■■□ 3.55
BIVM-ERCC5R4GMW8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
BIVM-ERCC5R4GMW8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
BIVM-ERCC5R4GMW8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC37.25■■■■□ 3.55
BIVM-ERCC5R4GMW8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC37.25■■■■□ 3.55
BIVM-ERCC5R4GMW8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
BIVM-ERCC5R4GMW8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
BIVM-ERCC5R4GMW8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
BIVM-ERCC5R4GMW8 LINC00543-201ENST00000567234 1845 ntBASIC37.24■■■■□ 3.55
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms