Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 AC138932.1-201ENST00000534164 6830 ntBASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC01558Q9Y6Z2 AC018445.3-201ENST00000624177 1945 ntBASIC11.52□□□□□ -0.56
LINC01558Q9Y6Z2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
LINC01558Q9Y6Z2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
LINC01558Q9Y6Z2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01558Q9Y6Z2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.52□□□□□ -0.56
LINC01558Q9Y6Z2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01558Q9Y6Z2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01558Q9Y6Z2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 LINC01006-201ENST00000333319 2292 ntBASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
LINC01558Q9Y6Z2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
LINC01558Q9Y6Z2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms