Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPCS1Q9Y6A9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPCS1Q9Y6A9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 LETM1P2-201ENST00000597330 2178 ntBASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 AC090340.1-201ENST00000620778 4980 ntBASIC15.21■□□□□ 0.02
SPCS1Q9Y6A9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.2■□□□□ 0.02
SPCS1Q9Y6A9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SPCS1Q9Y6A9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.18■□□□□ 0.02
SPCS1Q9Y6A9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 HCG11-201ENST00000411553 5696 ntBASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SPCS1Q9Y6A9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms