Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 SERBP1P1-201ENST00000396021 1160 ntBASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 AC027682.1-201ENST00000562846 899 ntBASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHGA7Q9Y5G6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
PCDHGA7Q9Y5G6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA7Q9Y5G6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGA7Q9Y5G6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA7Q9Y5G6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGA7Q9Y5G6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGA7Q9Y5G6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGA7Q9Y5G6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA7Q9Y5G6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA7Q9Y5G6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA7Q9Y5G6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHGA7Q9Y5G6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 AC099791.2-201ENST00000605725 427 ntBASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA7Q9Y5G6 ECEL1P1-201ENST00000373592 1742 ntBASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 AC087623.3-201ENST00000607047 1098 ntBASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA7Q9Y5G6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 AC131274.2-201ENST00000580697 1507 ntBASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 IRS3P-201ENST00000223076 1006 ntBASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 AC127496.7-201ENST00000625110 1798 ntBASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA7Q9Y5G6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA7Q9Y5G6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA7Q9Y5G6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms