Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 KRT18P60-201ENST00000312876 1297 ntBASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 AC011551.1-201ENST00000614101 683 ntBASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB1Q9Y5G3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB1Q9Y5G3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGB1Q9Y5G3 FAM99A-202ENST00000538190 1989 ntBASIC20.14■□□□□ 0.81
PCDHGB1Q9Y5G3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB1Q9Y5G3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGB1Q9Y5G3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGB1Q9Y5G3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGB1Q9Y5G3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB1Q9Y5G3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 MIR6765-201ENST00000614092 87 ntBASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGB1Q9Y5G3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGB1Q9Y5G3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB1Q9Y5G3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB1Q9Y5G3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB1Q9Y5G3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB1Q9Y5G3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB1Q9Y5G3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGB1Q9Y5G3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 AC010542.4-201ENST00000563151 1910 ntBASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB1Q9Y5G3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 AL592293.1-201ENST00000502889 1188 ntBASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 AC131274.2-201ENST00000580697 1507 ntBASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 AC087742.1-201ENST00000575880 1738 ntBASIC20.1■□□□□ 0.81
PCDHGB1Q9Y5G3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB1Q9Y5G3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PCDHGB1Q9Y5G3 AC005229.4-201ENST00000610085 2198 ntBASIC20.08■□□□□ 0.81
PCDHGB1Q9Y5G3 AC092667.1-201ENST00000434301 2586 ntBASIC20.08■□□□□ 0.81
PCDHGB1Q9Y5G3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGB1Q9Y5G3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms