Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC012354.3-201ENST00000623734 483 ntBASIC19.63■□□□□ 0.73
COPS3Q9UNS2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COPS3Q9UNS2 C11orf96-202ENST00000528572 1834 ntBASIC19.62■□□□□ 0.73
COPS3Q9UNS2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPS3Q9UNS2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.61■□□□□ 0.73
COPS3Q9UNS2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS3Q9UNS2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.61■□□□□ 0.73
COPS3Q9UNS2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.61■□□□□ 0.73
COPS3Q9UNS2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
COPS3Q9UNS2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.61■□□□□ 0.73
COPS3Q9UNS2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS3Q9UNS2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 AC137630.3-201ENST00000607245 391 ntBASIC19.6■□□□□ 0.73
COPS3Q9UNS2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPS3Q9UNS2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS3Q9UNS2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPS3Q9UNS2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COPS3Q9UNS2 YBX1P4-201ENST00000392794 808 ntBASIC19.58■□□□□ 0.72
COPS3Q9UNS2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.58■□□□□ 0.72
COPS3Q9UNS2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.58■□□□□ 0.72
COPS3Q9UNS2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COPS3Q9UNS2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.58■□□□□ 0.72
COPS3Q9UNS2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
COPS3Q9UNS2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
COPS3Q9UNS2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPS3Q9UNS2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPS3Q9UNS2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COPS3Q9UNS2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COPS3Q9UNS2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.57■□□□□ 0.72
COPS3Q9UNS2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPS3Q9UNS2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.57■□□□□ 0.72
COPS3Q9UNS2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPS3Q9UNS2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 LINC01529-204ENST00000636474 1715 ntBASIC19.56■□□□□ 0.72
COPS3Q9UNS2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.56■□□□□ 0.72
COPS3Q9UNS2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms