Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NLKQ9UBE8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.45■□□□□ 0.7
NLKQ9UBE8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NLKQ9UBE8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLKQ9UBE8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLKQ9UBE8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLKQ9UBE8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLKQ9UBE8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NLKQ9UBE8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.44■□□□□ 0.7
NLKQ9UBE8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 FBXW4P1-201ENST00000426721 2239 ntBASIC19.43■□□□□ 0.7
NLKQ9UBE8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 RARRES2P1-201ENST00000474487 481 ntBASIC19.43■□□□□ 0.7
NLKQ9UBE8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.43■□□□□ 0.7
NLKQ9UBE8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NLKQ9UBE8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLKQ9UBE8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLKQ9UBE8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLKQ9UBE8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NLKQ9UBE8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLKQ9UBE8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.42■□□□□ 0.7
NLKQ9UBE8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
NLKQ9UBE8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NLKQ9UBE8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.42■□□□□ 0.7
NLKQ9UBE8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 C11orf96-202ENST00000528572 1834 ntBASIC19.41■□□□□ 0.7
NLKQ9UBE8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NLKQ9UBE8 ESRRAP2-201ENST00000418437 1549 ntBASIC19.41■□□□□ 0.7
NLKQ9UBE8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.41■□□□□ 0.7
NLKQ9UBE8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.41■□□□□ 0.7
NLKQ9UBE8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NLKQ9UBE8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.41■□□□□ 0.7
NLKQ9UBE8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.41■□□□□ 0.7
NLKQ9UBE8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NLKQ9UBE8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLKQ9UBE8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
NLKQ9UBE8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLKQ9UBE8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.4■□□□□ 0.7
NLKQ9UBE8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NLKQ9UBE8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.4■□□□□ 0.7
NLKQ9UBE8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLKQ9UBE8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NLKQ9UBE8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NLKQ9UBE8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NLKQ9UBE8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NLKQ9UBE8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.39■□□□□ 0.69
NLKQ9UBE8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NLKQ9UBE8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLKQ9UBE8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLKQ9UBE8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.38■□□□□ 0.69
NLKQ9UBE8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLKQ9UBE8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.38■□□□□ 0.69
NLKQ9UBE8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NLKQ9UBE8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.38■□□□□ 0.69
NLKQ9UBE8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.38■□□□□ 0.69
NLKQ9UBE8 AF131216.4-201ENST00000638924 1588 ntBASIC19.38■□□□□ 0.69
NLKQ9UBE8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLKQ9UBE8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NLKQ9UBE8 AC092667.1-201ENST00000434301 2586 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms