Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC32.09■■■□□ 2.73
SLC52A1Q9NWF4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
SLC52A1Q9NWF4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC32.09■■■□□ 2.73
SLC52A1Q9NWF4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC32.09■■■□□ 2.73
SLC52A1Q9NWF4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
SLC52A1Q9NWF4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SLC52A1Q9NWF4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SLC52A1Q9NWF4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SLC52A1Q9NWF4 CROCCP5-201ENST00000436658 830 ntBASIC32.07■■■□□ 2.72
SLC52A1Q9NWF4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC32.07■■■□□ 2.72
SLC52A1Q9NWF4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC32.07■■■□□ 2.72
SLC52A1Q9NWF4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC32.07■■■□□ 2.72
SLC52A1Q9NWF4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC32.07■■■□□ 2.72
SLC52A1Q9NWF4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SLC52A1Q9NWF4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
SLC52A1Q9NWF4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC32.06■■■□□ 2.72
SLC52A1Q9NWF4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
SLC52A1Q9NWF4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SLC52A1Q9NWF4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 SMUG1P1-201ENST00000590640 811 ntBASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC32.04■■■□□ 2.72
SLC52A1Q9NWF4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.03■■■□□ 2.72
SLC52A1Q9NWF4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
SLC52A1Q9NWF4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
SLC52A1Q9NWF4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC32.02■■■□□ 2.72
SLC52A1Q9NWF4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
SLC52A1Q9NWF4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SLC52A1Q9NWF4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC32.01■■■□□ 2.72
SLC52A1Q9NWF4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SLC52A1Q9NWF4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
SLC52A1Q9NWF4 KRT18P11-201ENST00000435214 1283 ntBASIC32.01■■■□□ 2.71
SLC52A1Q9NWF4 NCF1B-203ENST00000435988 1254 ntBASIC32.01■■■□□ 2.71
SLC52A1Q9NWF4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC32.01■■■□□ 2.71
SLC52A1Q9NWF4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC32.01■■■□□ 2.71
SLC52A1Q9NWF4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
SLC52A1Q9NWF4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SLC52A1Q9NWF4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC32■■■□□ 2.71
SLC52A1Q9NWF4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
SLC52A1Q9NWF4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC32■■■□□ 2.71
SLC52A1Q9NWF4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC32■■■□□ 2.71
SLC52A1Q9NWF4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC32■■■□□ 2.71
SLC52A1Q9NWF4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC32■■■□□ 2.71
SLC52A1Q9NWF4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC32■■■□□ 2.71
SLC52A1Q9NWF4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SLC52A1Q9NWF4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SLC52A1Q9NWF4 AC006970.2-201ENST00000450065 779 ntBASIC31.99■■■□□ 2.71
SLC52A1Q9NWF4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.99■■■□□ 2.71
SLC52A1Q9NWF4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.99■■■□□ 2.71
SLC52A1Q9NWF4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SLC52A1Q9NWF4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SLC52A1Q9NWF4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 AC010141.3-201ENST00000456659 717 ntBASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 AL109923.1-201ENST00000618799 583 ntBASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SLC52A1Q9NWF4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC31.97■■■□□ 2.71
SLC52A1Q9NWF4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SLC52A1Q9NWF4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.97■■■□□ 2.71
SLC52A1Q9NWF4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SLC52A1Q9NWF4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SLC52A1Q9NWF4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms