Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 AC133561.4-201ENST00000566112 224 ntBASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 AC004687.1-201ENST00000579003 1625 ntBASIC20.2■□□□□ 0.82
SDHAF3Q9NRP4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.19■□□□□ 0.82
SDHAF3Q9NRP4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 EDA-201ENST00000338901 1233 ntBASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 MIR4767-201ENST00000582827 78 ntBASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.18■□□□□ 0.82
SDHAF3Q9NRP4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SDHAF3Q9NRP4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 OR2I1P-207ENST00000453522 948 ntBASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 AL355001.2-201ENST00000620617 1191 ntBASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.16■□□□□ 0.82
SDHAF3Q9NRP4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAF3Q9NRP4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SDHAF3Q9NRP4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 BX842568.3-201ENST00000418104 571 ntBASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHAF3Q9NRP4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms