Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A3Q9NQ40 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC52A3Q9NQ40 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A3Q9NQ40 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A3Q9NQ40 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC52A3Q9NQ40 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A3Q9NQ40 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A3Q9NQ40 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A3Q9NQ40 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC52A3Q9NQ40 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SLC52A3Q9NQ40 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A3Q9NQ40 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A3Q9NQ40 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A3Q9NQ40 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC52A3Q9NQ40 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 AC137630.3-201ENST00000607245 391 ntBASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 FAM99A-202ENST00000538190 1989 ntBASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A3Q9NQ40 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A3Q9NQ40 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SLC52A3Q9NQ40 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.96■□□□□ 0.95
SLC52A3Q9NQ40 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC52A3Q9NQ40 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A3Q9NQ40 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC52A3Q9NQ40 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC52A3Q9NQ40 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A3Q9NQ40 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SLC52A3Q9NQ40 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 LINC01960-201ENST00000563759 1884 ntBASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 AC103724.3-201ENST00000564481 992 ntBASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 DUX4L4-201ENST00000566884 1269 ntBASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A3Q9NQ40 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 MIR6722-201ENST00000617286 78 ntBASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC52A3Q9NQ40 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC52A3Q9NQ40 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A3Q9NQ40 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A3Q9NQ40 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
SLC52A3Q9NQ40 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
SLC52A3Q9NQ40 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC52A3Q9NQ40 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC52A3Q9NQ40 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SLC52A3Q9NQ40 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A3Q9NQ40 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A3Q9NQ40 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC52A3Q9NQ40 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC52A3Q9NQ40 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SLC52A3Q9NQ40 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms