Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDT1Q9H211 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDT1Q9H211 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.02■■□□□ 1.44
CDT1Q9H211 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.02■■□□□ 1.44
CDT1Q9H211 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDT1Q9H211 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDT1Q9H211 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.02■■□□□ 1.44
CDT1Q9H211 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDT1Q9H211 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDT1Q9H211 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDT1Q9H211 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.01■■□□□ 1.43
CDT1Q9H211 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDT1Q9H211 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDT1Q9H211 AP005435.1-201ENST00000529293 1178 ntBASIC24.01■■□□□ 1.43
CDT1Q9H211 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.01■■□□□ 1.43
CDT1Q9H211 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.01■■□□□ 1.43
CDT1Q9H211 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.01■■□□□ 1.43
CDT1Q9H211 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.01■■□□□ 1.43
CDT1Q9H211 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDT1Q9H211 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.01■■□□□ 1.43
CDT1Q9H211 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.01■■□□□ 1.43
CDT1Q9H211 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CDT1Q9H211 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.01■■□□□ 1.43
CDT1Q9H211 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDT1Q9H211 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDT1Q9H211 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDT1Q9H211 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDT1Q9H211 IRS3P-201ENST00000223076 1006 ntBASIC24■■□□□ 1.43
CDT1Q9H211 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CDT1Q9H211 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24■■□□□ 1.43
CDT1Q9H211 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24■■□□□ 1.43
CDT1Q9H211 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24■■□□□ 1.43
CDT1Q9H211 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CDT1Q9H211 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.99■■□□□ 1.43
CDT1Q9H211 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDT1Q9H211 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDT1Q9H211 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.99■■□□□ 1.43
CDT1Q9H211 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDT1Q9H211 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CDT1Q9H211 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDT1Q9H211 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDT1Q9H211 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CDT1Q9H211 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.98■■□□□ 1.43
CDT1Q9H211 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDT1Q9H211 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.98■■□□□ 1.43
CDT1Q9H211 AL031602.1-201ENST00000633169 911 ntBASIC23.98■■□□□ 1.43
CDT1Q9H211 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.98■■□□□ 1.43
CDT1Q9H211 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CDT1Q9H211 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CDT1Q9H211 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.97■■□□□ 1.43
CDT1Q9H211 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDT1Q9H211 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.97■■□□□ 1.43
CDT1Q9H211 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.97■■□□□ 1.43
CDT1Q9H211 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.97■■□□□ 1.43
CDT1Q9H211 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.96■■□□□ 1.43
CDT1Q9H211 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDT1Q9H211 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDT1Q9H211 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
CDT1Q9H211 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.96■■□□□ 1.43
CDT1Q9H211 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CDT1Q9H211 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDT1Q9H211 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
CDT1Q9H211 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.96■■□□□ 1.43
CDT1Q9H211 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.96■■□□□ 1.43
CDT1Q9H211 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDT1Q9H211 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDT1Q9H211 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDT1Q9H211 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDT1Q9H211 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.96■■□□□ 1.43
CDT1Q9H211 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CDT1Q9H211 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CDT1Q9H211 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDT1Q9H211 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.95■■□□□ 1.42
CDT1Q9H211 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CDT1Q9H211 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDT1Q9H211 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.95■■□□□ 1.42
CDT1Q9H211 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.95■■□□□ 1.42
CDT1Q9H211 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CDT1Q9H211 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.94■■□□□ 1.42
CDT1Q9H211 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDT1Q9H211 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.94■■□□□ 1.42
CDT1Q9H211 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDT1Q9H211 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDT1Q9H211 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.94■■□□□ 1.42
CDT1Q9H211 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDT1Q9H211 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDT1Q9H211 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.93■■□□□ 1.42
CDT1Q9H211 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDT1Q9H211 MIR572-201ENST00000384983 95 ntBASIC23.93■■□□□ 1.42
CDT1Q9H211 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.93■■□□□ 1.42
CDT1Q9H211 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDT1Q9H211 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDT1Q9H211 RARRES2P6-201ENST00000567333 442 ntBASIC23.93■■□□□ 1.42
CDT1Q9H211 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CDT1Q9H211 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.93■■□□□ 1.42
CDT1Q9H211 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDT1Q9H211 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDT1Q9H211 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.92■■□□□ 1.42
CDT1Q9H211 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDT1Q9H211 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms