Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CLPBQ9H078 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CLPBQ9H078 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
CLPBQ9H078 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.14■■□□□ 1.13
CLPBQ9H078 RASA4CP-201ENST00000424092 1398 ntBASIC22.13■■□□□ 1.13
CLPBQ9H078 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLPBQ9H078 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLPBQ9H078 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CLPBQ9H078 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLPBQ9H078 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLPBQ9H078 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.13■■□□□ 1.13
CLPBQ9H078 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CLPBQ9H078 AC136469.2-201ENST00000623944 1028 ntBASIC22.13■■□□□ 1.13
CLPBQ9H078 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.13■■□□□ 1.13
CLPBQ9H078 LINC01529-204ENST00000636474 1715 ntBASIC22.13■■□□□ 1.13
CLPBQ9H078 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
CLPBQ9H078 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.13■■□□□ 1.13
CLPBQ9H078 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLPBQ9H078 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CLPBQ9H078 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLPBQ9H078 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CLPBQ9H078 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLPBQ9H078 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CLPBQ9H078 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLPBQ9H078 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.12■■□□□ 1.13
CLPBQ9H078 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.12■■□□□ 1.13
CLPBQ9H078 AC027682.1-201ENST00000562846 899 ntBASIC22.12■■□□□ 1.13
CLPBQ9H078 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.12■■□□□ 1.13
CLPBQ9H078 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CLPBQ9H078 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLPBQ9H078 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CLPBQ9H078 C9orf163-202ENST00000624034 2573 ntBASIC22.11■■□□□ 1.13
CLPBQ9H078 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLPBQ9H078 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.11■■□□□ 1.13
CLPBQ9H078 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CLPBQ9H078 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLPBQ9H078 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLPBQ9H078 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.11■■□□□ 1.13
CLPBQ9H078 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLPBQ9H078 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
CLPBQ9H078 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.1■■□□□ 1.13
CLPBQ9H078 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLPBQ9H078 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.1■■□□□ 1.13
CLPBQ9H078 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.1■■□□□ 1.13
CLPBQ9H078 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.1■■□□□ 1.13
CLPBQ9H078 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.1■■□□□ 1.13
CLPBQ9H078 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLPBQ9H078 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLPBQ9H078 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
CLPBQ9H078 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.1■■□□□ 1.13
CLPBQ9H078 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLPBQ9H078 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLPBQ9H078 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLPBQ9H078 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLPBQ9H078 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLPBQ9H078 AC099791.1-201ENST00000416440 715 ntBASIC22.09■■□□□ 1.13
CLPBQ9H078 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.09■■□□□ 1.13
CLPBQ9H078 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.09■■□□□ 1.13
CLPBQ9H078 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.09■■□□□ 1.13
CLPBQ9H078 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLPBQ9H078 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CLPBQ9H078 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLPBQ9H078 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLPBQ9H078 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CLPBQ9H078 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.08■■□□□ 1.13
CLPBQ9H078 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLPBQ9H078 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLPBQ9H078 AC068473.5-201ENST00000616428 2072 ntBASIC22.08■■□□□ 1.12
CLPBQ9H078 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLPBQ9H078 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CLPBQ9H078 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CLPBQ9H078 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLPBQ9H078 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.07■■□□□ 1.12
CLPBQ9H078 pRNA.6-201ENST00000610482 90 ntBASIC22.07■■□□□ 1.12
CLPBQ9H078 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLPBQ9H078 pRNA.5-201ENST00000612139 90 ntBASIC22.07■■□□□ 1.12
CLPBQ9H078 pRNA.11-201ENST00000618423 90 ntBASIC22.07■■□□□ 1.12
CLPBQ9H078 pRNA.13-201ENST00000619112 90 ntBASIC22.07■■□□□ 1.12
CLPBQ9H078 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLPBQ9H078 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.07■■□□□ 1.12
CLPBQ9H078 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLPBQ9H078 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.07■■□□□ 1.12
CLPBQ9H078 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.07■■□□□ 1.12
CLPBQ9H078 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.06■■□□□ 1.12
CLPBQ9H078 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLPBQ9H078 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.06■■□□□ 1.12
CLPBQ9H078 DUX4L4-201ENST00000566884 1269 ntBASIC22.06■■□□□ 1.12
CLPBQ9H078 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.06■■□□□ 1.12
CLPBQ9H078 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLPBQ9H078 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.06■■□□□ 1.12
CLPBQ9H078 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLPBQ9H078 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLPBQ9H078 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CLPBQ9H078 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLPBQ9H078 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.06■■□□□ 1.12
CLPBQ9H078 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLPBQ9H078 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLPBQ9H078 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLPBQ9H078 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLPBQ9H078 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms