Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTFDC1Q9BY42 AC016769.1-201ENST00000409132 1010 ntBASIC27.16■■□□□ 1.94
RTFDC1Q9BY42 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.16■■□□□ 1.94
RTFDC1Q9BY42 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.16■■□□□ 1.94
RTFDC1Q9BY42 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTFDC1Q9BY42 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTFDC1Q9BY42 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RTFDC1Q9BY42 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTFDC1Q9BY42 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.15■■□□□ 1.94
RTFDC1Q9BY42 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTFDC1Q9BY42 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTFDC1Q9BY42 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RTFDC1Q9BY42 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.15■■□□□ 1.94
RTFDC1Q9BY42 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
RTFDC1Q9BY42 AC004854.2-201ENST00000608450 1441 ntBASIC27.15■■□□□ 1.94
RTFDC1Q9BY42 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
RTFDC1Q9BY42 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
RTFDC1Q9BY42 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
RTFDC1Q9BY42 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RTFDC1Q9BY42 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 AC026185.1-201ENST00000445748 174 ntBASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.13■■□□□ 1.93
RTFDC1Q9BY42 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RTFDC1Q9BY42 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RTFDC1Q9BY42 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.12■■□□□ 1.93
RTFDC1Q9BY42 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.12■■□□□ 1.93
RTFDC1Q9BY42 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC27.12■■□□□ 1.93
RTFDC1Q9BY42 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
RTFDC1Q9BY42 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RTFDC1Q9BY42 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RTFDC1Q9BY42 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 MAP2K4P1-201ENST00000438453 1195 ntBASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 BX005040.4-201ENST00000637145 1518 ntBASIC27.11■■□□□ 1.93
RTFDC1Q9BY42 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.1■■□□□ 1.93
RTFDC1Q9BY42 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.1■■□□□ 1.93
RTFDC1Q9BY42 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RTFDC1Q9BY42 AC104771.1-201ENST00000603335 964 ntBASIC27.1■■□□□ 1.93
RTFDC1Q9BY42 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.1■■□□□ 1.93
RTFDC1Q9BY42 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.1■■□□□ 1.93
RTFDC1Q9BY42 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RTFDC1Q9BY42 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
RTFDC1Q9BY42 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RTFDC1Q9BY42 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RTFDC1Q9BY42 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RTFDC1Q9BY42 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RTFDC1Q9BY42 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RTFDC1Q9BY42 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RTFDC1Q9BY42 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RTFDC1Q9BY42 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.08■■□□□ 1.93
RTFDC1Q9BY42 BID-214ENST00000617586 542 ntTSL 5 BASIC27.08■■□□□ 1.93
RTFDC1Q9BY42 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC27.08■■□□□ 1.93
RTFDC1Q9BY42 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.92
RTFDC1Q9BY42 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 CROCCP5-201ENST00000436658 830 ntBASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RTFDC1Q9BY42 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.06■■□□□ 1.92
RTFDC1Q9BY42 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 AC068587.7-201ENST00000641602 218 ntBASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms