Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
RPAP1Q9BWH6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 pRNA.6-201ENST00000610482 90 ntBASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 pRNA.5-201ENST00000612139 90 ntBASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 pRNA.11-201ENST00000618423 90 ntBASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 pRNA.13-201ENST00000619112 90 ntBASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RPAP1Q9BWH6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
RPAP1Q9BWH6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.86■■□□□ 1.89
RPAP1Q9BWH6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.86■■□□□ 1.89
RPAP1Q9BWH6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RPAP1Q9BWH6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.86■■□□□ 1.89
RPAP1Q9BWH6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RPAP1Q9BWH6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RPAP1Q9BWH6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.86■■□□□ 1.89
RPAP1Q9BWH6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 FP325331.1-202ENST00000623531 1380 ntBASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.85■■□□□ 1.89
RPAP1Q9BWH6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 SLC47A1P1-202ENST00000449666 945 ntBASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.84■■□□□ 1.89
RPAP1Q9BWH6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RPAP1Q9BWH6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RPAP1Q9BWH6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
RPAP1Q9BWH6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
RPAP1Q9BWH6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RPAP1Q9BWH6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.83■■□□□ 1.89
RPAP1Q9BWH6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.83■■□□□ 1.88
RPAP1Q9BWH6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RPAP1Q9BWH6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RPAP1Q9BWH6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RPAP1Q9BWH6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 YBX1P1-201ENST00000445822 960 ntBASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.82■■□□□ 1.88
RPAP1Q9BWH6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.81■■□□□ 1.88
RPAP1Q9BWH6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.81■■□□□ 1.88
RPAP1Q9BWH6 AC144652.1-201ENST00000609974 1624 ntBASIC26.81■■□□□ 1.88
RPAP1Q9BWH6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RPAP1Q9BWH6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RPAP1Q9BWH6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.81■■□□□ 1.88
RPAP1Q9BWH6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
RPAP1Q9BWH6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RPAP1Q9BWH6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
RPAP1Q9BWH6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RPAP1Q9BWH6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
RPAP1Q9BWH6 AC079630.1-202ENST00000618127 1840 ntBASIC26.8■■□□□ 1.88
RPAP1Q9BWH6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
RPAP1Q9BWH6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.8■■□□□ 1.88
RPAP1Q9BWH6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 AC034268.1-201ENST00000441047 882 ntBASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 AC126544.1-201ENST00000580842 1059 ntBASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms