Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCM2Q9BSQ5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 MIR638-201ENST00000385237 100 ntBASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCM2Q9BSQ5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CCM2Q9BSQ5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.7■■□□□ 1.07
CCM2Q9BSQ5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.7■■□□□ 1.07
CCM2Q9BSQ5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 AL355001.2-201ENST00000620617 1191 ntBASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCM2Q9BSQ5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCM2Q9BSQ5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCM2Q9BSQ5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.69■■□□□ 1.06
CCM2Q9BSQ5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
CCM2Q9BSQ5 AC005837.3-201ENST00000612163 286 ntBASIC21.69■■□□□ 1.06
CCM2Q9BSQ5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCM2Q9BSQ5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.69■■□□□ 1.06
CCM2Q9BSQ5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 OR2I1P-207ENST00000453522 948 ntBASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 AC012676.1-201ENST00000574705 1949 ntBASIC21.68■■□□□ 1.06
CCM2Q9BSQ5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 C9orf163-202ENST00000624034 2573 ntBASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCM2Q9BSQ5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCM2Q9BSQ5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCM2Q9BSQ5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCM2Q9BSQ5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCM2Q9BSQ5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCM2Q9BSQ5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCM2Q9BSQ5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCM2Q9BSQ5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CCM2Q9BSQ5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCM2Q9BSQ5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CCM2Q9BSQ5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCM2Q9BSQ5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms