Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMSS1Q9BQ75 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.75■□□□□ 0.59
CMSS1Q9BQ75 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMSS1Q9BQ75 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMSS1Q9BQ75 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CMSS1Q9BQ75 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 AC144652.1-201ENST00000609974 1624 ntBASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 TSPY13P-201ENST00000338964 914 ntBASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 AC092053.2-201ENST00000640557 1818 ntBASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.71■□□□□ 0.59
CMSS1Q9BQ75 AC007375.3-201ENST00000600936 2314 ntBASIC18.71■□□□□ 0.58
CMSS1Q9BQ75 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMSS1Q9BQ75 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CMSS1Q9BQ75 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms