Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VRK1Q99986 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
VRK1Q99986 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.31■□□□□ 0.68
VRK1Q99986 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
VRK1Q99986 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
VRK1Q99986 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.31■□□□□ 0.68
VRK1Q99986 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VRK1Q99986 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VRK1Q99986 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK1Q99986 ALDH1A3-203ENST00000557963 1670 ntBASIC19.3■□□□□ 0.68
VRK1Q99986 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.3■□□□□ 0.68
VRK1Q99986 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.3■□□□□ 0.68
VRK1Q99986 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VRK1Q99986 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VRK1Q99986 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
VRK1Q99986 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VRK1Q99986 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VRK1Q99986 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.29■□□□□ 0.68
VRK1Q99986 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VRK1Q99986 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VRK1Q99986 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK1Q99986 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VRK1Q99986 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK1Q99986 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VRK1Q99986 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK1Q99986 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VRK1Q99986 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK1Q99986 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VRK1Q99986 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.27■□□□□ 0.68
VRK1Q99986 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.27■□□□□ 0.68
VRK1Q99986 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.27■□□□□ 0.68
VRK1Q99986 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VRK1Q99986 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VRK1Q99986 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.27■□□□□ 0.67
VRK1Q99986 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VRK1Q99986 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VRK1Q99986 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VRK1Q99986 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK1Q99986 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK1Q99986 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK1Q99986 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.26■□□□□ 0.67
VRK1Q99986 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.26■□□□□ 0.67
VRK1Q99986 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.26■□□□□ 0.67
VRK1Q99986 EDA-201ENST00000338901 1233 ntBASIC19.26■□□□□ 0.67
VRK1Q99986 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
VRK1Q99986 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.26■□□□□ 0.67
VRK1Q99986 AL355001.2-201ENST00000620617 1191 ntBASIC19.26■□□□□ 0.67
VRK1Q99986 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK1Q99986 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK1Q99986 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
VRK1Q99986 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.26■□□□□ 0.67
VRK1Q99986 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VRK1Q99986 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VRK1Q99986 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.25■□□□□ 0.67
VRK1Q99986 C17orf82-201ENST00000623772 1530 ntBASIC19.25■□□□□ 0.67
VRK1Q99986 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VRK1Q99986 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VRK1Q99986 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VRK1Q99986 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VRK1Q99986 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VRK1Q99986 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.25■□□□□ 0.67
VRK1Q99986 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VRK1Q99986 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.25■□□□□ 0.67
VRK1Q99986 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.25■□□□□ 0.67
VRK1Q99986 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.25■□□□□ 0.67
VRK1Q99986 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.25■□□□□ 0.67
VRK1Q99986 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VRK1Q99986 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.25■□□□□ 0.67
VRK1Q99986 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.25■□□□□ 0.67
VRK1Q99986 AC241377.3-202ENST00000626088 1088 ntBASIC19.25■□□□□ 0.67
VRK1Q99986 AC241585.3-202ENST00000628937 1088 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms