Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH15Q96QU1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDH15Q96QU1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH15Q96QU1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH15Q96QU1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH15Q96QU1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH15Q96QU1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH15Q96QU1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH15Q96QU1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH15Q96QU1 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 BID-214ENST00000617586 542 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 AL355802.2-201ENST00000402069 882 ntBASIC21.76■■□□□ 1.07
PCDH15Q96QU1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.76■■□□□ 1.07
PCDH15Q96QU1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH15Q96QU1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
PCDH15Q96QU1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH15Q96QU1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCDH15Q96QU1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH15Q96QU1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH15Q96QU1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH15Q96QU1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH15Q96QU1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 NCF1B-203ENST00000435988 1254 ntBASIC21.72■■□□□ 1.07
PCDH15Q96QU1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH15Q96QU1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH15Q96QU1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH15Q96QU1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH15Q96QU1 AC006970.2-201ENST00000450065 779 ntBASIC21.71■■□□□ 1.07
PCDH15Q96QU1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.71■■□□□ 1.07
PCDH15Q96QU1 AL109923.1-201ENST00000618799 583 ntBASIC21.71■■□□□ 1.07
PCDH15Q96QU1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDH15Q96QU1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDH15Q96QU1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDH15Q96QU1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDH15Q96QU1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDH15Q96QU1 KRT19P1-201ENST00000405746 1186 ntBASIC21.7■■□□□ 1.07
PCDH15Q96QU1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDH15Q96QU1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH15Q96QU1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH15Q96QU1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH15Q96QU1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms