Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 AC105233.4-201ENST00000642045 216 ntBASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC46A1Q96NT5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 DUX4L4-201ENST00000566884 1269 ntBASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 AC080038.1-201ENST00000611274 1154 ntBASIC21.16■□□□□ 0.98
SLC46A1Q96NT5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC46A1Q96NT5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC46A1Q96NT5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.14■□□□□ 0.98
SLC46A1Q96NT5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.14■□□□□ 0.98
SLC46A1Q96NT5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SLC46A1Q96NT5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC46A1Q96NT5 AC006015.1-201ENST00000429970 570 ntBASIC21.14■□□□□ 0.97
SLC46A1Q96NT5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC46A1Q96NT5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.14■□□□□ 0.97
SLC46A1Q96NT5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC46A1Q96NT5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 ABCB10P4-201ENST00000566803 2184 ntBASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC46A1Q96NT5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms