Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 AC073130.3-201ENST00000624389 2278 ntBASIC18.98■□□□□ 0.63
CMTM3Q96MX0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 AC144652.1-201ENST00000609974 1624 ntBASIC18.97■□□□□ 0.63
CMTM3Q96MX0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 AC005229.4-201ENST00000610085 2198 ntBASIC18.97■□□□□ 0.63
CMTM3Q96MX0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
CMTM3Q96MX0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 LONRF2P2-201ENST00000439212 571 ntBASIC18.96■□□□□ 0.63
CMTM3Q96MX0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.96■□□□□ 0.63
CMTM3Q96MX0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CMTM3Q96MX0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CMTM3Q96MX0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CMTM3Q96MX0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CMTM3Q96MX0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CMTM3Q96MX0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CMTM3Q96MX0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.91■□□□□ 0.62
CMTM3Q96MX0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms