Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
CFAP53Q96M91 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CFAP53Q96M91 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
CFAP53Q96M91 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC29.58■■■□□ 2.33
CFAP53Q96M91 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
CFAP53Q96M91 DUSP8P5-201ENST00000422884 1815 ntBASIC29.57■■■□□ 2.32
CFAP53Q96M91 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP53Q96M91 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC29.57■■■□□ 2.32
CFAP53Q96M91 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
CFAP53Q96M91 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
CFAP53Q96M91 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
CFAP53Q96M91 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.57■■■□□ 2.32
CFAP53Q96M91 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP53Q96M91 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
CFAP53Q96M91 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC29.57■■■□□ 2.32
CFAP53Q96M91 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP53Q96M91 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP53Q96M91 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC29.56■■■□□ 2.32
CFAP53Q96M91 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC29.56■■■□□ 2.32
CFAP53Q96M91 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP53Q96M91 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP53Q96M91 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
CFAP53Q96M91 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
CFAP53Q96M91 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP53Q96M91 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC29.55■■■□□ 2.32
CFAP53Q96M91 AP005435.1-201ENST00000529293 1178 ntBASIC29.55■■■□□ 2.32
CFAP53Q96M91 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CFAP53Q96M91 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
CFAP53Q96M91 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
CFAP53Q96M91 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC29.55■■■□□ 2.32
CFAP53Q96M91 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP53Q96M91 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP53Q96M91 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP53Q96M91 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP53Q96M91 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29.54■■■□□ 2.32
CFAP53Q96M91 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.54■■■□□ 2.32
CFAP53Q96M91 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
CFAP53Q96M91 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP53Q96M91 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP53Q96M91 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFAP53Q96M91 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
CFAP53Q96M91 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC29.53■■■□□ 2.32
CFAP53Q96M91 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC29.53■■■□□ 2.32
CFAP53Q96M91 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC29.53■■■□□ 2.32
CFAP53Q96M91 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC29.53■■■□□ 2.32
CFAP53Q96M91 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.53■■■□□ 2.32
CFAP53Q96M91 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC29.53■■■□□ 2.32
CFAP53Q96M91 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CFAP53Q96M91 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP53Q96M91 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.52■■■□□ 2.32
CFAP53Q96M91 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP53Q96M91 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC29.52■■■□□ 2.32
CFAP53Q96M91 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC29.52■■■□□ 2.32
CFAP53Q96M91 ZNRF2P3-201ENST00000424200 374 ntBASIC29.52■■■□□ 2.32
CFAP53Q96M91 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC29.52■■■□□ 2.32
CFAP53Q96M91 IGHV3-19-201ENST00000521488 291 ntBASIC29.52■■■□□ 2.32
CFAP53Q96M91 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC29.52■■■□□ 2.32
CFAP53Q96M91 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP53Q96M91 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFAP53Q96M91 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC29.51■■■□□ 2.32
CFAP53Q96M91 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CFAP53Q96M91 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.32
CFAP53Q96M91 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.51■■■□□ 2.31
CFAP53Q96M91 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29.51■■■□□ 2.31
CFAP53Q96M91 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP53Q96M91 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.51■■■□□ 2.31
CFAP53Q96M91 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
CFAP53Q96M91 AC068587.7-201ENST00000641602 218 ntBASIC29.51■■■□□ 2.31
CFAP53Q96M91 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC29.51■■■□□ 2.31
CFAP53Q96M91 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP53Q96M91 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFAP53Q96M91 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29.5■■■□□ 2.31
CFAP53Q96M91 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
CFAP53Q96M91 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.5■■■□□ 2.31
CFAP53Q96M91 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.5■■■□□ 2.31
CFAP53Q96M91 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.5■■■□□ 2.31
CFAP53Q96M91 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP53Q96M91 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.5■■■□□ 2.31
CFAP53Q96M91 AL031602.1-201ENST00000633169 911 ntBASIC29.5■■■□□ 2.31
CFAP53Q96M91 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFAP53Q96M91 TSPY26P-201ENST00000476365 1326 ntBASIC29.49■■■□□ 2.31
CFAP53Q96M91 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CFAP53Q96M91 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.49■■■□□ 2.31
CFAP53Q96M91 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CFAP53Q96M91 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CFAP53Q96M91 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.48■■■□□ 2.31
CFAP53Q96M91 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CFAP53Q96M91 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.48■■■□□ 2.31
CFAP53Q96M91 EI24-211ENST00000534546 1544 ntTSL 2 BASIC29.48■■■□□ 2.31
CFAP53Q96M91 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CFAP53Q96M91 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
CFAP53Q96M91 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC29.47■■■□□ 2.31
CFAP53Q96M91 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CFAP53Q96M91 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CFAP53Q96M91 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
CFAP53Q96M91 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
CFAP53Q96M91 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC29.46■■■□□ 2.31
CFAP53Q96M91 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CFAP53Q96M91 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.46■■■□□ 2.31
CFAP53Q96M91 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC29.46■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms